Hi,
I actually wanted to know whether I should try building code to run on my pixhawk on WSL, or on eclipse? Which one would be better .
WSL is better.
cygwin is not really supported anymore. It might work, but it is not recommended.
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The instructions for WSL are quite clear, and it can be set up in a matter of minutes, depending on your comfort level with the command line and internet connection speed.
If you want a graphical editor, VS Code is well supported and works nicely with the environment.