Quadcopter Number

On Mission Planner what is the parameter that needs changed in order for the logfile saved folder to be labeled 2 instead of 1

you need to change SYSID_THISMAV
and reboot.
http://ardupilot.org/copter/docs/parameters.html#sysid-thismav-mavlink-system-id-of-this-vehicle

Thanks again i just didn’t know what to look for.

David Ardis